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phage K Staphylococcus aureus temperature-sensitive USA300 polyamines loss-of-function mutation

Loss-of-function Mutations in Phage K gp102 Lead to Improved Antibacterial Activity against USA300 MRSA Growing at 37°C or Lacking the potABCD Operon

Abstract ID: 52-SV

Susan M. Lehman *, Rohit Kongari, Adam M. Glass, Matthew Koert, Melissa D. Ray, Austin Neel, Alexandra Christensen, Roger D. Plaut, Scott Stibitz

  1. Center for Biologics Evaluation and Research
  2. US Food and Drug Administration
  3. Silver Spring MD

Susan Lehman (susan.lehman@fda.hhs.gov)

Among Staphylococcus aureus infections, the USA300 lineage is a frequent cause of invasive disease. We observed that phage K, a model S. aureus myophage, exhibits temperature-sensitive growth on USA300 strains, with the wild-type phage providing poorer growth suppression in broth and forming smaller and fainter plaques at 37°C vs. 30°C. We isolated 65 mutants of phage K that had improved plaquing characteristics at 37°C when compared to the parental phage. In all 65 mutants, this phenotype was attributable to loss-of-function (LoF) mutations in gp102, which encodes a protein of unknown function that has homologs only among the Herelleviridae (SPO1-like myophages infecting gram-positive bacteria).

Additional experiments with representative mutants consistently showed that the temperature-sensitive plaque phenotype was specific to USA300 MRSA strains and that Gp102 disruption was correlated with improved suppression of bacterial growth in broth and improved antibacterial activity in a mouse model of upper respiratory tract infection. The same genotype and in vitro phenotypes could be replicated in close relatives of phage K. Gp102 disruption did not have a detectable effect on adsorption but did delay cell culture lysis relative to wild-type under permissive infection conditions, suggesting that gp102 conservation might be maintained by selective pressure for more rapid replication.

Molecular modeling of Gp102 predicts a protein with two helix-turn-helix domains that displays some similarity to DNA-binding proteins such as transcription factors. While its function remains unclear, gp102 is a conserved gene that is important to the infection process of Kayvirus phages, and it appears that the manner in which USA300 strains defend against them at 37°C can be overcome by gp102 LoF mutations. Additionally, deleting the polyamine uptake system (potABCD) from USA300 strains reduces the activity of phage K at both 37°C and 30°C; Gp102 disruption overcomes this phage growth restriction as well.